Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2363PFAM: protein of unknown function DUF1684; KEGG: ami:Amir_2981 protein of unknown function DUF1684. (265 aa)    
Predicted Functional Partners:
Tpau_2364
Hypothetical protein.
       0.773
Tpau_2362
KEGG: rop:ROP_15590 putative protein-tyrosine- phosphatase.
       0.714
Tpau_3863
Band 7 protein; KEGG: cef:CE2656 hypothetical protein; PFAM: band 7 protein; SMART: band 7 protein.
 
   
 0.594
Tpau_1971
PFAM: extracellular solute-binding protein family 5; KEGG: mgi:Mflv_0119 extracellular solute-binding protein.
  
  
 0.569
Tpau_2365
PFAM: Protein of unknown function DUF2252; KEGG: rop:ROP_21970 hypothetical protein.
       0.547
Tpau_2050
Extracellular solute-binding protein family 3; KEGG: sgr:SGR_5758 putative ABC transporter substrate-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3.
 
     0.498
Tpau_2110
PFAM: putative esterase; KEGG: rop:ROP_52000 putative esterase.
  
     0.485
Tpau_0155
KEGG: sgr:SGR_4457 hypothetical protein.
  
     0.483
Tpau_2053
PFAM: FR47 domain protein; GCN5-related N- acetyltransferase; KEGG: rha:RHA1_ro01753 acetyltransferase.
  
     0.469
Tpau_2990
PFAM: GCN5-related N-acetyltransferase; KEGG: rha:RHA1_ro01753 acetyltransferase.
  
     0.453
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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