Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
Tpau_2365PFAM: Protein of unknown function DUF2252; KEGG: rop:ROP_21970 hypothetical protein. (458 aa)    
Predicted Functional Partners:
Tpau_2364
Hypothetical protein.
       0.552
Tpau_2363
PFAM: protein of unknown function DUF1684; KEGG: ami:Amir_2981 protein of unknown function DUF1684.
       0.547
Tpau_2366
PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: rsa:RSal33209_0474 siderophore-interacting protein.
       0.521
Tpau_2362
KEGG: rop:ROP_15590 putative protein-tyrosine- phosphatase.
       0.508
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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