Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2367PFAM: Mammalian cell entry related domain protein; KEGG: nfa:nfa11150 putative Mce family protein. (381 aa)    
Predicted Functional Partners:
Tpau_3793
PFAM: Mammalian cell entry related domain protein; KEGG: rop:ROP_18090 putative Mce family protein.
 
 
 0.883
Tpau_3794
PFAM: Mammalian cell entry related domain protein; KEGG: rop:ROP_18080 putative Mce family protein.
 
 
 0.864
Tpau_1243
KEGG: nfa:nfa11160 putative Mce family protein; TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein.
 
 
 0.859
Tpau_1242
PFAM: Mammalian cell entry related domain protein; KEGG: nfa:nfa11180 putative Mce family protein.
 
 
 0.842
Tpau_1241
PFAM: Mammalian cell entry related domain protein; KEGG: nfa:nfa11190 putative Mce family protein.
 
 
 0.831
Tpau_4175
PFAM: Mammalian cell entry related domain protein; KEGG: nfa:nfa11180 putative Mce family protein.
 
 
 0.815
Tpau_3795
PFAM: Mammalian cell entry related domain protein; KEGG: rop:ROP_18070 putative Mce family protein.
 
 
 0.806
Tpau_3796
PFAM: Mammalian cell entry related domain protein; KEGG: rop:ROP_18060 putative Mce family protein.
 
   
 0.789
Tpau_0881
Hypothetical protein; KEGG: spn:SP_1772 cell wall surface anchor family protein.
  
 
   0.786
Tpau_1333
Hypothetical protein; KEGG: rha:RHA1_ro05481 protease.
 
 
 
 0.779
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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