Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Tpau_2390PFAM: protein of unknown function DUF343; KEGG: rer:RER_32750 hypothetical protein; Belongs to the UPF0434 family. (71 aa)    
Predicted Functional Partners:
Tpau_2389
KEGG: mab:MAB_2352 putative 3-methyladenine DNA glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); Belongs to the DNA glycosylase MPG family.
       0.836
Tpau_2391
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: msm:MSMEG_2034 aryl-alcohol dehydrogenase.
       0.778
Tpau_2392
KEGG: mmi:MMAR_5327 hypothetical protein.
       0.778
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
       0.758
Tpau_1896
PFAM: Protein of unknown function DUF2029; KEGG: rer:RER_28550 arabinosyltransferase AftC.
  
     0.752
Tpau_0171
KEGG: mab:MAB_0178 cutinase precursor.
  
    0.747
Tpau_1488
PFAM: acyl-ACP thioesterase; KEGG: mtb:TBMG_01985 hypothetical protein.
  
     0.741
Tpau_0170
KEGG: nfa:nfa1860 hypothetical protein.
  
    0.740
Tpau_3629
PFAM: histidine triad (HIT) protein; KEGG: mab:MAB_0676c HIT-like (histidine triad) protein.
  
    0.729
Tpau_3503
PFAM: acyl-ACP thioesterase; KEGG: nfa:nfa50880 hypothetical protein.
  
     0.725
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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