Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2391PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: msm:MSMEG_2034 aryl-alcohol dehydrogenase. (358 aa)    
Predicted Functional Partners:
Tpau_2259
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rop:ROP_04530 flavin-containing amine oxidase.
     
  0.900
Tpau_2389
KEGG: mab:MAB_2352 putative 3-methyladenine DNA glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); Belongs to the DNA glycosylase MPG family.
       0.778
Tpau_2390
PFAM: protein of unknown function DUF343; KEGG: rer:RER_32750 hypothetical protein; Belongs to the UPF0434 family.
       0.778
Tpau_2392
KEGG: mmi:MMAR_5327 hypothetical protein.
       0.778
Tpau_2276
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mtb:TBMG_03771 dehydrogenase.
  
  
 0.749
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
  
    0.676
Tpau_2393
KEGG: aau:AAur_1551 putative ABC transporter, ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.522
Tpau_2394
KEGG: saq:Sare_3403 multidrug ABC transporter inner membrane protein; TIGRFAM: ABC drug efflux pump, inner membrane subunit, DrrB family; PFAM: ABC-2 type transporter.
       0.522
Tpau_2395
PFAM: regulatory protein TetR; KEGG: rop:ROP_06770 putative TetR family transcriptional regulator.
       0.522
Tpau_0168
PFAM: putative esterase; LGFP repeat protein; KEGG: nfa:nfa1840 putative esterase.
  
 
 0.493
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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