Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_2449PFAM: protein of unknown function DUF1508; KEGG: tde:TDE0826 hypothetical protein. (61 aa)    
Predicted Functional Partners:
Tpau_2497
KEGG: nfa:nfa49840 hypothetical protein; PFAM: Curculin domain protein (mannose-binding) lectin; Peptidoglycan-binding lysin domain; SMART: Curculin domain protein (mannose-binding) lectin; Peptidoglycan-binding LysM.
  
   0.794
Tpau_0821
PFAM: Transglycosylase domain protein; KEGG: nfa:nfa6370 hypothetical protein.
  
   0.715
Tpau_3031
PFAM: Transglycosylase domain protein; KEGG: mjl:Mjls_3569 transglycosylase domain- containing protein.
  
   0.715
Tpau_2447
KEGG: aba:Acid345_4150 hypothetical protein.
 
     0.624
Tpau_2448
KEGG: rba:RB3221 hypothetical protein.
 
     0.585
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.539
Tpau_2450
KEGG: sgr:SGR_5956 hypothetical protein.
       0.491
Tpau_2446
Hypothetical protein.
       0.488
Tpau_2325
PFAM: cytochrome b5; fatty acid desaturase; KEGG: nfa:nfa49300 hypothetical protein.
  
     0.462
Tpau_2451
KEGG: sco:SCO0407 transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; PBS lyase HEAT domain protein repeat-containing protein.
  
    0.446
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.