Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2467KEGG: nfa:nfa11910 hypothetical protein. (383 aa)    
Predicted Functional Partners:
Tpau_2466
PFAM: Uncharacterised conserved protein UCP07580; KEGG: rop:ROP_04670 hypothetical protein.
 
     0.961
Tpau_2465
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: rha:RHA1_ro00436 hypothetical protein.
 
     0.922
Tpau_3803
KEGG: mab:MAB_1289c hypothetical protein.
  
     0.769
Tpau_3598
KEGG: mab:MAB_4180 IclR family transcriptional regulator; PFAM: regulatory protein IclR; SMART: regulatory protein IclR.
  
     0.739
Tpau_3599
KEGG: mab:MAB_4179c hypothetical protein.
  
     0.704
Tpau_1198
PFAM: regulatory protein TetR; KEGG: rer:RER_37140 TetR family transcriptional regulator.
  
     0.637
Tpau_2468
PFAM: Beta-ketoacyl synthase; KEGG: mva:Mvan_3756 3-oxoacyl-(acyl carrier protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.636
Tpau_3853
KEGG: nfa:nfa5190 hypothetical protein.
  
     0.621
Tpau_3601
KEGG: mab:MAB_4177c hypothetical protein.
  
     0.619
Tpau_2204
PFAM: Abortive infection protein; KEGG: nfa:nfa5750 hypothetical protein.
  
     0.531
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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