Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Tpau_2486PFAM: Rhomboid family protein; KEGG: rop:ROP_35060 rhomboid family protein. (240 aa)    
Predicted Functional Partners:
Tpau_2488
Hypothetical protein.
       0.648
Tpau_2487
KEGG: mpa:MAP3132 hypothetical protein; PFAM: ABC transporter related; cobalt transport protein; SMART: AAA ATPase.
  
    0.642
Tpau_2489
Choloyl-CoA hydrolase; KEGG: mav:MAV_3169 acyl-CoA thioesterase; PFAM: acyl-CoA thioesterase.
       0.639
Tpau_2490
TIGRFAM: pyruvate kinase; KEGG: rha:RHA1_ro01007 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family.
       0.604
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.589
Tpau_2492
KEGG: mab:MAB_1277 hypothetical protein.
       0.508
Tpau_3269
5-formyltetrahydrofolate cyclo-ligase; KEGG: svi:Svir_32680 5,10-methenyltetrahydrofolate synthetase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase.
  
  
 0.448
Tpau_2091
Band 7 protein; KEGG: rop:ROP_70070 stomatin family protein; PFAM: band 7 protein; SMART: band 7 protein.
   
 0.447
Tpau_3863
Band 7 protein; KEGG: cef:CE2656 hypothetical protein; PFAM: band 7 protein; SMART: band 7 protein.
   
 0.447
tatB
Twin-arginine translocation protein, TatB subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
   
 
 0.422
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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