Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2492KEGG: mab:MAB_1277 hypothetical protein. (490 aa)    
Predicted Functional Partners:
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
  
    0.701
Tpau_2490
TIGRFAM: pyruvate kinase; KEGG: rha:RHA1_ro01007 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family.
       0.668
Tpau_2487
KEGG: mpa:MAP3132 hypothetical protein; PFAM: ABC transporter related; cobalt transport protein; SMART: AAA ATPase.
       0.607
Tpau_2488
Hypothetical protein.
       0.607
Tpau_2489
Choloyl-CoA hydrolase; KEGG: mav:MAV_3169 acyl-CoA thioesterase; PFAM: acyl-CoA thioesterase.
       0.607
Tpau_2495
PFAM: Lycopene beta and epsilon cyclase; KEGG: nfa:nfa34900 putative lycopene cyclase.
  
    0.587
Tpau_2494
KEGG: ami:Amir_4995 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR.
     
 0.556
Tpau_2493
KEGG: bcv:Bcav_0103 histidine kinase.
       0.553
Tpau_1581
PFAM: polysaccharide biosynthesis protein; KEGG: rha:RHA1_ro05738 MOP superfamily O-antigen transporter.
 
     0.547
Tpau_1582
KEGG: mab:MAB_1016c hypothetical protein.
 
     0.520
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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