Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_2511KEGG: rha:RHA1_ro07194 hypothetical protein. (594 aa)    
Predicted Functional Partners:
Tpau_2513
KEGG: nfa:nfa35660 putative ABC transporter membrane protein; TIGRFAM: ABC drug efflux pump, inner membrane subunit, DrrB family; PFAM: ABC-2 type transporter.
 
   
 0.913
Tpau_2512
KEGG: rop:ROP_69810 putative ABC transporter ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
   
 
 0.793
Tpau_2514
PFAM: cytochrome oxidase assembly; KEGG: mkm:Mkms_2474 cytochrome oxidase assembly.
 
   
 0.777
Tpau_0876
KEGG: mbt:JTY_3504 hypothetical protein.
  
     0.754
Tpau_0730
KEGG: rer:RER_17050 hypothetical protein.
  
     0.750
Tpau_1300
KEGG: mav:MAV_1560 hypothetical protein.
  
     0.737
Tpau_1470
KEGG: rer:RER_37980 hypothetical protein.
  
     0.732
Tpau_3265
KEGG: msm:MSMEG_5468 hypothetical protein.
  
     0.728
Tpau_1127
KEGG: mab:MAB_3524c hypothetical protein.
 
     0.726
Tpau_0118
KEGG: mav:MAV_0179 hypothetical protein.
  
     0.723
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.