STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_2533PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: mjl:Mjls_3197 acyl-CoA dehydrogenase domain- containing protein. (382 aa)    
Predicted Functional Partners:
Tpau_0775
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: rer:RER_56240 acetyl-CoA acyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.935
Tpau_3043
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: krh:KRH_05060 putative glutaryl-CoA dehydrogenase.
  
  
 
0.923
Tpau_3321
KEGG: rha:RHA1_ro06095 fatty acid CoA carboxylase B subunit; PFAM: carboxyl transferase.
  
 
 0.920
Tpau_1329
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: svi:Svir_17470 acyl-CoA dehydrogenase.
  
  
 
0.914
Tpau_4183
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mab:MAB_0851 fatty oxidation protein FadB.
 
 0.903
Tpau_0342
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mab:MAB_0851 fatty oxidation protein FadB.
 
 0.902
Tpau_2831
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rer:RER_17570 enoyl-CoA hydratase.
   
 0.811
Tpau_3826
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro04652 enoyl-CoA hydratase.
   
 0.811
Tpau_3837
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nfa:nfa4820 enoyl-CoA hydratase.
   
 0.811
Tpau_3816
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro04688 enoyl-CoA hydratase.
   
 0.810
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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