Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2571PFAM: protein of unknown function DUF1486; KEGG: saq:Sare_2735 hypothetical protein. (189 aa)    
Predicted Functional Partners:
Tpau_2572
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: ami:Amir_4056 transcriptional regulator, TetR family.
 
     0.780
Tpau_2570
Ceramidase; KEGG: cai:Caci_0673 neutral/alkaline nonlysosomal ceramidase; PFAM: Neutral/alkaline nonlysosomal ceramidase.
       0.675
Tpau_2660
KEGG: nfa:nfa17510 putative lipoprotein.
  
     0.610
Tpau_1059
KEGG: rer:RER_40920 hypothetical protein.
  
     0.575
Tpau_2089
Hypothetical protein; KEGG: mbt:JTY_0967 putative monooxygenase.
  
     0.562
Tpau_3868
KEGG: cgt:cgR_0900 hypothetical protein.
  
     0.544
Tpau_3483
PFAM: NAD-dependent epimerase/dehydratase; KEGG: rlt:Rleg2_0410 NAD-dependent epimerase/dehydratase.
  
     0.506
Tpau_0612
KEGG: mgi:Mflv_3147 hypothetical protein.
 
    0.437
Tpau_0765
KEGG: nfa:nfa34980 hypothetical protein.
  
     0.436
Tpau_3581
PFAM: beta-lactamase domain protein; KEGG: mjl:Mjls_5118 hypothetical protein.
 
     0.429
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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