Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2603PFAM: lipopolysaccharide biosynthesis protein; KEGG: rop:ROP_55230 putative protein-tyrosine kinase. (204 aa)    
Predicted Functional Partners:
Tpau_2271
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: rha:RHA1_ro05742 sugar transferase; PFAM: sugar transferase.
 
  
 0.984
Tpau_2605
KEGG: pna:Pnap_3184 hypothetical protein.
 
  
 0.890
Tpau_1584
PFAM: lipopolysaccharide biosynthesis protein; KEGG: rha:RHA1_ro05735 protein-tyrosine kinase, C- terminal.
 
 
0.883
Tpau_2602
KEGG: kra:Krad_1829 acetyltransferase-like protein.
 
  
 0.862
Tpau_2615
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: rha:RHA1_ro05438 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase.
 
  
 0.833
Tpau_2604
PFAM: O-antigen polymerase; KEGG: rhi:NGR_b18250 exopolysaccharide production protein ExoQ.
  
  
 0.825
Tpau_2601
PFAM: glycosyl transferase family 2; KEGG: bbe:BBR47_17410 hypothetical protein.
  
  
 0.818
Tpau_2609
PFAM: lipopolysaccharide biosynthesis protein; KEGG: sco:SCO2712 hypothetical protein.
 
 
 0.801
Tpau_2600
Hypothetical protein; KEGG: cms:CMS_1589 putative surface polysaccharide flippase.
  
  
 0.747
Tpau_0052
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: rer:RER_13170 glycosyltransferase; PFAM: sugar transferase.
 
  
 0.712
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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