Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2666KEGG: ypb:YPTS_4078 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (263 aa)    
Predicted Functional Partners:
Tpau_2665
PFAM: transport system permease protein; KEGG: kra:Krad_3704 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.996
Tpau_2663
PFAM: periplasmic binding protein; KEGG: cjk:jk1887 putative iron ABC transport system, solute-binding protein.
 
  
 0.995
Tpau_2664
PFAM: transport system permease protein; KEGG: car:cauri_0742 iron ABC transport system, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.994
Tpau_4123
PFAM: periplasmic binding protein; KEGG: cdi:DIP1062 putative iron-siderophore uptake system exported solute-binding component.
 
  
 0.700
Tpau_3694
PFAM: periplasmic binding protein; KEGG: rha:RHA1_ro02320 ABC Fe(3+) transporter, substrate binding component.
 
  
 0.682
Tpau_2667
TIGRFAM: carotene biosynthesis associated membrane protein; KEGG: rop:ROP_08360 mannosyltransferase MptA.
       0.656
Tpau_3865
PFAM: periplasmic binding protein; KEGG: rer:RER_23560 iron-siderophore binding protein.
 
  
 0.653
Tpau_3758
PFAM: transport system permease protein; KEGG: sco:SCO0497 iron-siderophore permease transmembrane protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.637
Tpau_3757
PFAM: transport system permease protein; KEGG: sgr:SGR_6712 iron ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
    0.576
Tpau_3348
PFAM: iron permease FTR1; Peptidase M75, Imelysin; KEGG: mab:MAB_1159 putative iron permease FTR1.
  
  
 0.539
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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