Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_2679KEGG: rop:ROP_08480 hypothetical protein. (136 aa)    
Predicted Functional Partners:
Tpau_2677
KEGG: mjl:Mjls_3290 arsenite-transporting ATPase.
 
    0.852
Tpau_2678
PFAM: Polyketide cyclase/dehydrase; cyclase/dehydrase; KEGG: rop:ROP_08470 hypothetical protein.
 
     0.845
Tpau_2675
PFAM: ROK family protein; KEGG: nfa:nfa17130 putative sugar kinase.
       0.813
Tpau_2676
KEGG: rsq:Rsph17025_4215 hypothetical protein.
       0.778
Tpau_2805
KEGG: rha:RHA1_ro01294 hypothetical protein.
 
     0.775
Tpau_2935
PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: rha:RHA1_ro06454 hypothetical protein.
  
     0.769
Tpau_2926
KEGG: rer:RER_23680 hypothetical protein.
  
     0.766
Tpau_1886
KEGG: mav:MAV_3587 hypothetical protein.
  
     0.754
Tpau_2919
PFAM: glycoside hydrolase family 57; KEGG: rer:RER_23710 hypothetical protein; Belongs to the glycosyl hydrolase 57 family.
  
     0.754
Tpau_0902
KEGG: mab:MAB_3725c hypothetical protein.
  
     0.748
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.