STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_2728KEGG: mgi:Mflv_2770 hypothetical protein. (171 aa)    
Predicted Functional Partners:
Tpau_1882
KEGG: mab:MAB_3005c hypothetical protein.
  
     0.737
Tpau_2801
PFAM: DNA polymerase III delta; KEGG: nfa:nfa13940 hypothetical protein.
  
     0.735
Tpau_1891
KEGG: mmi:MMAR_2036 hypothetical protein.
  
   
 0.681
Tpau_2336
Transcriptional regulator, MerR family; SMART: regulatory protein MerR; KEGG: mab:MAB_2406 putative HTH-type transcriptional regulator.
  
     0.680
Tpau_1186
KEGG: mgi:Mflv_4727 hypothetical protein.
  
   
 0.658
Tpau_3959
PFAM: metallophosphoesterase; KEGG: mav:MAV_0445 secreted protein.
  
     0.658
rbpA
Conserved hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.656
Tpau_2729
PFAM: beta-lactamase; KEGG: rop:ROP_09270 hypothetical protein.
       0.656
whiA
Protein of unknown function DUF199; Involved in cell division and chromosome segregation.
  
     0.607
Tpau_0240
KEGG: mab:MAB_0545 protein lsr2 precursor.
  
     0.606
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.