Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2730KEGG: mab:MAB_1013 hypothetical protein. (661 aa)    
Predicted Functional Partners:
Tpau_1581
PFAM: polysaccharide biosynthesis protein; KEGG: rha:RHA1_ro05738 MOP superfamily O-antigen transporter.
  
     0.774
Tpau_1582
KEGG: mab:MAB_1016c hypothetical protein.
  
     0.774
Tpau_0868
KEGG: mab:MAB_4706c hypothetical protein.
  
     0.771
Tpau_1333
Hypothetical protein; KEGG: rha:RHA1_ro05481 protease.
 
  
 0.770
Tpau_0881
Hypothetical protein; KEGG: spn:SP_1772 cell wall surface anchor family protein.
 
 
 0.762
Tpau_2367
PFAM: Mammalian cell entry related domain protein; KEGG: nfa:nfa11150 putative Mce family protein.
  
     0.753
Tpau_2527
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mab:MAB_4629 hypothetical protein.
  
     0.753
Tpau_2870
KEGG: mab:MAB_0652 hypothetical protein.
  
     0.752
Tpau_0334
KEGG: mgi:Mflv_5453 hypothetical protein.
  
   
 0.750
Tpau_3922
Hypothetical protein; KEGG: spn:SP_1772 cell wall surface anchor family protein.
 
     0.739
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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