Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2826PFAM: protein of unknown function DUF1446; KEGG: msm:MSMEG_5490 hypothetical protein. (580 aa)    
Predicted Functional Partners:
Tpau_2825
KEGG: mva:Mvan_6059 hypothetical protein.
 
     0.932
Tpau_2828
PFAM: carboxyl transferase; KEGG: rha:RHA1_ro01931 methylcrotonoyl-CoA carboxylase, beta chain.
 
  
 0.892
Tpau_2832
PFAM: regulatory protein TetR; KEGG: rha:RHA1_ro01927 TetR family transcriptional regulator.
 
     0.861
Tpau_2830
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: mva:Mvan_4850 acyl-CoA dehydrogenase domain- containing protein.
 
  
 0.837
Tpau_2831
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rer:RER_17570 enoyl-CoA hydratase.
 
  
 0.834
Tpau_2829
PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: rer:RER_17550 acyl-CoA carboxylase alpha chain.
  
  
 0.826
Tpau_2827
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: rer:RER_17530 acyl-CoA dehydrogenase.
 
  
 0.820
Tpau_1317
PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; carboxyl transferase; biotin/lipoyl attachment domain- containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: tfu:Tfu_1530 acetyl/propionyl-CoA carboxylase alpha subunit.
  
  
 0.762
Tpau_1872
PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; carboxyl transferase; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: rha:RHA1_ro02782 carboxylase.
  
  
 0.762
Tpau_3124
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
  
 0.607
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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