Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2829PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: rer:RER_17550 acyl-CoA carboxylase alpha chain. (651 aa)    
Predicted Functional Partners:
Tpau_0860
PFAM: carboxyl transferase; KEGG: rer:RER_45670 acetyl-CoA carboxylase beta chain.
 
 0.975
Tpau_1594
Urea amidolyase related protein; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; TIGRFAM: urea amidolyase related protein; KEGG: msm:MSMEG_2187 UreA amidolyase; PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1.
 
 
 0.967
Tpau_2828
PFAM: carboxyl transferase; KEGG: rha:RHA1_ro01931 methylcrotonoyl-CoA carboxylase, beta chain.
 
 0.950
Tpau_1315
PFAM: MaoC domain protein dehydratase; Beta- ketoacyl synthase; Acyl transferase; domain of unknown function DUF1729; KEGG: nfa:nfa12570 putative fatty acid synthase.
 
  
 0.919
Tpau_2831
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rer:RER_17570 enoyl-CoA hydratase.
 
 
 0.835
Tpau_2826
PFAM: protein of unknown function DUF1446; KEGG: msm:MSMEG_5490 hypothetical protein.
  
  
 0.826
Tpau_2830
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: mva:Mvan_4850 acyl-CoA dehydrogenase domain- containing protein.
  
 
 0.813
Tpau_2726
PFAM: Beta-ketoacyl synthase; KEGG: mva:Mvan_3756 3-oxoacyl-(acyl carrier protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.798
Tpau_2468
PFAM: Beta-ketoacyl synthase; KEGG: mva:Mvan_3756 3-oxoacyl-(acyl carrier protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.796
Tpau_2832
PFAM: regulatory protein TetR; KEGG: rha:RHA1_ro01927 TetR family transcriptional regulator.
   
   0.776
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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