Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2832PFAM: regulatory protein TetR; KEGG: rha:RHA1_ro01927 TetR family transcriptional regulator. (204 aa)    
Predicted Functional Partners:
Tpau_2825
KEGG: mva:Mvan_6059 hypothetical protein.
 
     0.891
Tpau_2826
PFAM: protein of unknown function DUF1446; KEGG: msm:MSMEG_5490 hypothetical protein.
 
     0.861
Tpau_2830
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: mva:Mvan_4850 acyl-CoA dehydrogenase domain- containing protein.
 
     0.828
Tpau_2831
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rer:RER_17570 enoyl-CoA hydratase.
 
     0.807
Tpau_2828
PFAM: carboxyl transferase; KEGG: rha:RHA1_ro01931 methylcrotonoyl-CoA carboxylase, beta chain.
 
     0.805
Tpau_2829
PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: rer:RER_17550 acyl-CoA carboxylase alpha chain.
   
   0.776
Tpau_2827
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: rer:RER_17530 acyl-CoA dehydrogenase.
 
     0.749
Tpau_0136
KEGG: nfa:nfa1290 putative transcriptional regulator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator.
   
    0.524
Tpau_0415
KEGG: rha:RHA1_ro05189 xylose transporter.
  
     0.501
Tpau_2088
KEGG: rha:RHA1_ro05227 hypothetical protein.
  
     0.485
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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