Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2914KEGG: mgi:Mflv_1048 hypothetical protein. (180 aa)    
Predicted Functional Partners:
Tpau_2913
PFAM: NUDIX hydrolase; KEGG: nfa:nfa42900 hypothetical protein.
       0.586
Tpau_2915
Endothelin-converting enzyme 1; KEGG: nfa:nfa22800 putative peptidase; PFAM: peptidase M13; Peptidase M13, neprilysin- like.
       0.558
Tpau_2911
KEGG: mva:Mvan_2104 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase.
       0.421
Tpau_2912
KEGG: msm:MSMEG_2355 hypothetical protein.
       0.421
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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