Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2920PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; KEGG: nfa:nfa42820 putative glycosyltransferase. (435 aa)    
Predicted Functional Partners:
Tpau_2919
PFAM: glycoside hydrolase family 57; KEGG: rer:RER_23710 hypothetical protein; Belongs to the glycosyl hydrolase 57 family.
 
 0.999
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.970
Tpau_2918
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rer:RER_23720 methyltransferase.
 
   
 0.961
glgE
Alpha amylase catalytic region; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
   
 0.934
Tpau_3268
PFAM: Nucleotidyl transferase; KEGG: mab:MAB_1086 putative UTP-glucose-1-phosphate uridylyltransferase (GalU).
    
 0.906
Tpau_3642
KEGG: rer:RER_09680 alpha,alpha-trehalose-phosphate synthase; PFAM: glycosyl transferase family 20.
    
 0.906
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
    
 0.881
Tpau_0068
Glucose-1-phosphate cytidylyltransferase; KEGG: sco:SCO0393 transferase.
  
 0.833
Tpau_2926
KEGG: rer:RER_23680 hypothetical protein.
 
  
 0.757
Tpau_2805
KEGG: rha:RHA1_ro01294 hypothetical protein.
  
  
 0.721
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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