Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2974PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rop:ROP_57060 putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (309 aa)    
Predicted Functional Partners:
Tpau_0476
PFAM: alpha/beta hydrolase fold; KEGG: mav:MAV_4120 hydrolase, alpha/beta fold family protein, putative.
 
      0.890
Tpau_3600
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mjl:Mjls_5029 short chain dehydrogenase.
  
 
   0.776
Tpau_2701
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rme:Rmet_1333 acetoacetyl-CoA reductase.
  
 
   0.774
Tpau_0389
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rop:ROP_38490 putative oxidoreductase.
  
 
   0.758
Tpau_0387
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rop:ROP_38490 putative oxidoreductase.
  
 
   0.629
Tpau_2975
KEGG: nfa:nfa43210 hypothetical protein; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin.
       0.604
Tpau_3663
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nfa:nfa30340 short chain dehydrogenase.
  
 
   0.586
Tpau_2976
PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rha:RHA1_ro06423 CobW protein.
       0.538
Tpau_2977
Rhodanese domain protein; KEGG: rha:RHA1_ro00857 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; Belongs to the UPF0176 family.
       0.538
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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