Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2982KEGG: mjl:Mjls_2528 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA. (305 aa)    
Predicted Functional Partners:
Tpau_2978
KEGG: nfa:nfa18260 hypothetical protein.
 
  
 0.785
Tpau_2979
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nfa:nfa18270 putative transporter.
 
  
 0.745
ssuB
ABC transporter related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
  
 0.694
Tpau_2981
PFAM: sulfatase; KEGG: rer:RER_16070 arylsulfatase.
 
  
 0.662
Tpau_3693
Amino acid adenylation domain protein; KEGG: rop:ROP_20370 non-ribosomal peptide synthetase; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein.
 
  
 0.594
Tpau_3137
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: mgi:Mflv_0723 substrate-binding region of ABC- type glycine betaine transport system.
 
  
 0.533
Tpau_1373
Thioester reductase domain protein; KEGG: mab:MAB_2962 fatty-acid-CoA ligase FadD; TIGRFAM: thioester reductase domain protein; PFAM: Male sterility domain; AMP-dependent synthetase and ligase; phosphopantetheine-binding.
  
  
 0.532
Tpau_3476
KEGG: stp:Strop_2778 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; Acyl transferase; KR domain protein; Thioesterase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding.
  
  
 0.502
Tpau_1372
KEGG: rer:RER_53410 alkanesulfonate monooxygenase.
 
  
 0.449
Tpau_3138
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rer:RER_48630 ABC transporter permease protein.
 
  
 0.434
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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