Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2992PFAM: major facilitator superfamily MFS_1; KEGG: bfa:Bfae_28500 major facilitator superfamily transporter. (413 aa)    
Predicted Functional Partners:
Tpau_2993
PFAM: NUDIX hydrolase; KEGG: ami:Amir_3404 NUDIX hydrolase.
 
     0.793
Tpau_2990
PFAM: GCN5-related N-acetyltransferase; KEGG: rha:RHA1_ro01753 acetyltransferase.
       0.467
Tpau_2991
PFAM: polysaccharide deacetylase; KEGG: nfa:nfa55250 putative polysaccharide deacetylase.
       0.467
Tpau_2988
KEGG: mav:MAV_2783 ArsR family protein transcriptional regulator; PFAM: regulatory protein ArsR; transcriptional regulator PadR family protein; SMART: regulatory protein ArsR.
       0.417
Tpau_2989
PFAM: Activator of Hsp90 ATPase 1 family protein; Polyketide cyclase/dehydrase; KEGG: mmi:MMAR_2815 hypothetical protein.
       0.417
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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