Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3001PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mab:MAB_3080 putative antibiotic biosynthesis monooxygenase. (93 aa)    
Predicted Functional Partners:
Tpau_3312
PFAM: protein of unknown function DUF1396; KEGG: mbo:Mb1301c putative lipoprotein LprA.
  
     0.666
Tpau_1149
KEGG: rop:ROP_60070 hypothetical protein.
  
     0.654
Tpau_1490
PFAM: cutinase; KEGG: msm:MSMEG_1403 cutinase superfamily protein.
  
     0.626
Tpau_2412
KEGG: mmi:MMAR_2582 hypothetical protein.
  
     0.614
Tpau_0367
PFAM: protein of unknown function DUF1396; KEGG: mjl:Mjls_2429 hypothetical protein.
  
     0.611
Tpau_0433
KEGG: mpa:MAP2368c hypothetical protein.
 
   
 0.596
Tpau_2324
PFAM: protein of unknown function DUF1396; KEGG: mbt:JTY_1404 putative lipoprotein.
  
     0.595
Tpau_2599
PFAM: lipolytic protein G-D-S-L family; KEGG: mbt:JTY_0531 hypothetical protein.
  
     0.594
Tpau_0334
KEGG: mgi:Mflv_5453 hypothetical protein.
  
     0.540
Tpau_0938
PFAM: conserved hypothetical protein; KEGG: mab:MAB_1509 hypothetical protein.
 
     0.537
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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