Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Tpau_3041KEGG: nfa:nfa45300 hypothetical protein. (298 aa)    
Predicted Functional Partners:
Tpau_0818
KEGG: mab:MAB_0865 molybdopterin biosynthesis protein Mog; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain.
  
 0.760
Tpau_3042
PFAM: ABC-1 domain protein; KEGG: mab:MAB_3504 ABC transporter ATP-binding protein.
       0.738
thiG
Thiazole biosynthesis family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
  
 0.683
Tpau_3747
KEGG: mgi:Mflv_0196 sulfur carrier protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein.
  
 
 0.665
Tpau_0819
PFAM: molybdopterin biosynthesis MoaE protein; KEGG: msm:MSMEG_5701 molybdopterin converting factor, subunit 2.
  
 0.646
Tpau_2910
KEGG: rop:ROP_65190 cysteine desulfurase; PFAM: aminotransferase class V.
   
 0.603
Tpau_1490
PFAM: cutinase; KEGG: msm:MSMEG_1403 cutinase superfamily protein.
  
 
 0.590
Tpau_0902
KEGG: mab:MAB_3725c hypothetical protein.
  
     0.558
Tpau_3378
KEGG: nfa:nfa8520 hypothetical protein.
  
 
 0.534
Tpau_2386
KEGG: rer:RER_32690 hypothetical protein.
 
 0.519
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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