Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Tpau_3066PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO2502 transport protein. (473 aa)    
Predicted Functional Partners:
Tpau_2703
PFAM: major facilitator superfamily MFS_1; KEGG: rop:ROP_05990 putative drug resistance efflux protein.
  
     0.711
Tpau_0456
PFAM: major facilitator superfamily MFS_1; KEGG: bcj:BCAM1381 major facilitator superfamily protein.
  
     0.663
Tpau_3065
SMART: helix-turn-helix domain protein; KEGG: sco:SCO2501 DNA-binding protein.
       0.550
Tpau_0209
PFAM: major facilitator superfamily MFS_1; KEGG: art:Arth_3774 major facilitator transporter.
  
     0.532
Tpau_1659
KEGG: svi:Svir_13380 drug resistance transporter, Bcr/CflA subfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1.
  
     0.484
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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