Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
Tpau_3072KEGG: rer:RER_27090 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (254 aa)    
Predicted Functional Partners:
Tpau_3073
KEGG: rer:RER_27080 ABC transporter permease protein.
 
     0.935
Tpau_0100
KEGG: rha:RHA1_ro02954 anibiotic ABC transporter efflux pump.
  
 
 0.611
Tpau_3074
KEGG: sgr:SGR_2124 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; regulatory protein MarR; SMART: regulatory protein ArsR.
       0.605
Tpau_3071
PFAM: AMP-dependent synthetase and ligase; KEGG: ami:Amir_2275 AMP-dependent synthetase and ligase.
       0.592
Tpau_4151
KEGG: nfa:nfa32520 putative ABC transporter ATP- binding protein; PFAM: ABC transporter related; CBS domain containing protein; SMART: AAA ATPase.
 
    
0.573
Tpau_1202
KEGG: rer:RER_41440 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.512
Tpau_1355
KEGG: sma:SAV_5345 ABC transporter integral membrane protein.
 
 
 0.462
Tpau_2394
KEGG: saq:Sare_3403 multidrug ABC transporter inner membrane protein; TIGRFAM: ABC drug efflux pump, inner membrane subunit, DrrB family; PFAM: ABC-2 type transporter.
 
  
 0.461
Tpau_2622
KEGG: nca:Noca_0737 ABC transporter related; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase.
 
 0.456
Tpau_3688
KEGG: cef:CE1565 putative ABC transporter permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
 0.449
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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