Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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Score
Tpau_3133PFAM: regulatory protein TetR; KEGG: mab:MAB_1576 TetR family transcriptional regulator. (204 aa)    
Predicted Functional Partners:
Tpau_0085
PFAM: regulatory protein TetR; KEGG: sen:SACE_3479 TetR family transcriptional regulator.
  
     0.771
Tpau_2087
PFAM: regulatory protein TetR; KEGG: sen:SACE_3473 TetR family transcriptional regulator.
  
     0.730
Tpau_3796
PFAM: Mammalian cell entry related domain protein; KEGG: rop:ROP_18060 putative Mce family protein.
  
     0.724
coaA
TIGRFAM: pantothenate kinase; KEGG: rop:ROP_59190 pantothenate kinase.
       0.701
Tpau_2367
PFAM: Mammalian cell entry related domain protein; KEGG: nfa:nfa11150 putative Mce family protein.
  
     0.694
Tpau_3378
KEGG: nfa:nfa8520 hypothetical protein.
  
   
 0.684
Tpau_3922
Hypothetical protein; KEGG: spn:SP_1772 cell wall surface anchor family protein.
  
     0.670
Tpau_0881
Hypothetical protein; KEGG: spn:SP_1772 cell wall surface anchor family protein.
  
     0.669
Tpau_2062
Hypothetical protein; KEGG: similar to CG16995 CG16995-PA.
  
     0.658
Tpau_0332
Secretion protein snm4; KEGG: msm:MSMEG_0068 transmembrane protein; TIGRFAM: secretion protein snm4; PFAM: protein of unknown function DUF571.
  
     0.651
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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