Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3134PFAM: Protein of unknown function DUF2236; KEGG: mjl:Mjls_0728 hypothetical protein. (334 aa)    
Predicted Functional Partners:
Tpau_3794
PFAM: Mammalian cell entry related domain protein; KEGG: rop:ROP_18080 putative Mce family protein.
  
     0.658
Tpau_3796
PFAM: Mammalian cell entry related domain protein; KEGG: rop:ROP_18060 putative Mce family protein.
  
     0.621
Tpau_3651
KEGG: msm:MSMEG_0923 hypothetical protein.
  
     0.607
Tpau_0075
KEGG: swi:Swit_0389 hypothetical protein.
  
     0.603
Tpau_3793
PFAM: Mammalian cell entry related domain protein; KEGG: rop:ROP_18090 putative Mce family protein.
  
     0.578
Tpau_0332
Secretion protein snm4; KEGG: msm:MSMEG_0068 transmembrane protein; TIGRFAM: secretion protein snm4; PFAM: protein of unknown function DUF571.
  
     0.575
Tpau_1490
PFAM: cutinase; KEGG: msm:MSMEG_1403 cutinase superfamily protein.
  
     0.555
Tpau_4180
PFAM: Protein of unknown function DUF2236; KEGG: msm:MSMEG_3590 hypothetical protein.
  
     0.547
Tpau_1112
KEGG: rha:RHA1_ro06347 hypothetical protein.
  
     0.543
Tpau_3135
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
       0.525
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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