Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3138PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rer:RER_48630 ABC transporter permease protein. (286 aa)    
Predicted Functional Partners:
Tpau_3136
ABC transporter related protein; KEGG: tfu:Tfu_1505 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.997
Tpau_3137
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: mgi:Mflv_0723 substrate-binding region of ABC- type glycine betaine transport system.
 
 
 0.997
Tpau_2978
KEGG: nfa:nfa18260 hypothetical protein.
 
 
 0.923
ssuB
ABC transporter related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.856
Tpau_3325
KEGG: bln:Blon_0418 ABC transporter related; PFAM: ABC transporter related; ABC nitrate/sulphonate/bicarbonate family transporter, ATPase subunit; SMART: AAA ATPase.
 
 
 0.752
Tpau_3135
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
    0.701
Tpau_1372
KEGG: rer:RER_53410 alkanesulfonate monooxygenase.
 
  
 0.559
Tpau_3139
PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: ckp:ckrop_0210 putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.522
Tpau_3134
PFAM: Protein of unknown function DUF2236; KEGG: mjl:Mjls_0728 hypothetical protein.
       0.438
Tpau_2982
KEGG: mjl:Mjls_2528 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA.
 
  
 0.434
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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