Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3142PFAM: protein of unknown function DUF255; KEGG: nfa:nfa48210 hypothetical protein. (656 aa)    
Predicted Functional Partners:
Tpau_3143
PFAM: glycosyl transferase family 39; KEGG: fal:FRAAL3990 putative integral membrane protein.
       0.738
Tpau_3144
KEGG: nfa:nfa48230 hypothetical protein.
       0.680
mca
Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily.
       0.680
Tpau_0077
PFAM: glycoside hydrolase family 5; KEGG: psa:PST_2494 endoglucanase precursor(endo-1,4- beta-glucanase)protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 
 0.659
Tpau_0078
Hypothetical protein; KEGG: xop:PXO_03299 endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 
 0.659
Tpau_0079
PFAM: glycoside hydrolase family 5; KEGG: xop:PXO_03301 endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 
 0.659
Tpau_3146
KEGG: mgi:Mflv_2049 hypothetical protein.
       0.579
Tpau_3147
Conserved hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.
       0.579
Tpau_3141
Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).
       0.470
Tpau_2224
SMART: low-density lipoprotein receptor YWTD repeat; KEGG: ara:Arad_4078 hypothetical protein.
  
 
   0.453
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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