Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3202PFAM: Linocin_M18 bacteriocin protein; KEGG: mmi:MMAR_4893 29 kDa antigen Cfp29. (265 aa)    
Predicted Functional Partners:
Tpau_3201
KEGG: msm:MSMEG_5829 Dyp-type peroxidase; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase.
 
 
 
 0.996
Tpau_3347
Dyp-type peroxidase family; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
 
 
 0.662
Tpau_3203
KEGG: cai:Caci_0684 ATPase AAA-2 domain protein; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; AAA ATPase central domain protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; Belongs to the ClpA/ClpB family.
       0.615
Tpau_3200
Hypothetical protein.
       0.537
Tpau_3548
KEGG: rer:RER_48110 hypothetical protein.
      
 0.502
Tpau_3199
KEGG: mab:MAB_0997c hypothetical protein.
       0.434
Tpau_3205
KEGG: mab:MAB_2491c hypothetical protein.
       0.416
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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