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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_3207TIGRFAM: probable F420-dependent oxidoreductase; KEGG: svi:Svir_38250 flavin-dependent oxidoreductase, F420-dependent methylene- tetrahydromethanopterin reductase. (272 aa)    
Predicted Functional Partners:
Tpau_3206
PFAM: dienelactone hydrolase; KEGG: mab:MAB_3510c putative dienelactone hydrolase.
       0.779
Tpau_2972
PFAM: NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone); KEGG: mab:MAB_3417c NADPH-dependent FMN reductase.
  
 
 0.713
Tpau_3208
PFAM: Limonene-12-epoxide hydrolase; KEGG: mmi:MMAR_1973 hypothetical protein.
 
     0.671
Tpau_1399
PFAM: DSBA oxidoreductase; KEGG: mab:MAB_1572 hypothetical protein.
   
    0.634
Tpau_2496
Thioredoxin; KEGG: rop:ROP_07180 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; Belongs to the thioredoxin family.
   
    0.545
Tpau_0337
PFAM: nitroreductase; KEGG: fal:FRAAL6601 putative oxidoreductase.
 
  
 0.438
Tpau_3814
PPOX class putative F420-dependent enzyme; KEGG: msm:MSMEG_0048 pyridoxamine 5'-phosphate oxidase family protein; TIGRFAM: PPOX class probable F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding.
 
     0.423
Tpau_4235
KEGG: mva:Mvan_6070 hypothetical protein.
  
     0.417
Tpau_0956
KEGG: nfa:nfa48300 hypothetical protein.
  
   
 0.415
Tpau_1993
PPOX class putative F420-dependent enzyme; KEGG: mpa:MAP2229 hypothetical protein; TIGRFAM: PPOX class probable F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding.
  
     0.408
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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