Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3255PFAM: AzlC family protein; KEGG: mab:MAB_3369 putative integral membrane amino acid transport protein. (230 aa)    
Predicted Functional Partners:
Tpau_3256
PFAM: branched-chain amino acid transport; KEGG: mab:MAB_3370 branched chain amino acid ABC transporter.
 
  
 0.982
Tpau_3257
PFAM: alpha/beta hydrolase fold; KEGG: rop:ROP_62750 putative hydrolase.
       0.772
Tpau_3254
KEGG: mab:MAB_3368c AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type.
  
  
 0.699
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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