Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3271PFAM: regulatory protein TetR; KEGG: mav:MAV_5227 TetR-family protein transcriptional regulator, putative. (201 aa)    
Predicted Functional Partners:
Tpau_0085
PFAM: regulatory protein TetR; KEGG: sen:SACE_3479 TetR family transcriptional regulator.
  
     0.662
Tpau_3133
PFAM: regulatory protein TetR; KEGG: mab:MAB_1576 TetR family transcriptional regulator.
  
     0.619
Tpau_1406
KEGG: mab:MAB_0672c hypothetical protein.
  
     0.597
Tpau_3273
KEGG: rer:RER_38550 hypothetical protein.
 
     0.583
Tpau_3272
Regulatory protein, FmdB family; KEGG: mab:MAB_1084c hypothetical protein; TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB.
       0.565
Tpau_2812
PFAM: cyclase/dehydrase; KEGG: mbt:JTY_0876 hypothetical protein.
  
     0.541
Tpau_3651
KEGG: msm:MSMEG_0923 hypothetical protein.
  
     0.514
Tpau_1957
PFAM: regulatory protein TetR; KEGG: sen:SACE_3959 TetR family transcriptional regulator.
  
     0.506
Tpau_0079
PFAM: glycoside hydrolase family 5; KEGG: xop:PXO_03301 endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.505
Tpau_0077
PFAM: glycoside hydrolase family 5; KEGG: psa:PST_2494 endoglucanase precursor(endo-1,4- beta-glucanase)protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.500
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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