Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3300KEGG: nfa:nfa30170 hypothetical protein. (287 aa)    
Predicted Functional Partners:
Tpau_3301
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: pde:Pden_4519 activator of HSP90 ATPase 1 family protein.
       0.641
Tpau_3298
SMART: von Willebrand factor type A; KEGG: mjl:Mjls_4693 von Willebrand factor, type A.
       0.586
Tpau_3299
KEGG: rha:RHA1_ro05589 magnesium chelatase subunit ChlI.
       0.586
Tpau_0123
KEGG: svi:Svir_26770 hypothetical protein.
  
     0.576
Tpau_0122
KEGG: stp:Strop_4198 hypothetical protein.
  
    0.521
Tpau_0345
PFAM: ANTAR domain protein; GAF domain protein; KEGG: kra:Krad_2459 response regulator receiver and ANTAR domain protein.
  
     0.513
Tpau_1032
PFAM: condensation domain protein; KEGG: rer:RER_47370 hypothetical protein.
  
     0.482
Tpau_3302
Transcriptional regulator, ArsR family; KEGG: sme:SMc02639 putative transcription regulator protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
       0.476
Tpau_0075
KEGG: swi:Swit_0389 hypothetical protein.
  
     0.433
Tpau_0285
KEGG: rsa:RSal33209_0055 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
  
     0.432
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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