Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3301PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: pde:Pden_4519 activator of HSP90 ATPase 1 family protein. (155 aa)    
Predicted Functional Partners:
Tpau_3302
Transcriptional regulator, ArsR family; KEGG: sme:SMc02639 putative transcription regulator protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
 
  
 0.881
Tpau_1200
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rer:RER_41460 ABC transporter permease protein.
  
    0.710
Tpau_3300
KEGG: nfa:nfa30170 hypothetical protein.
       0.641
Tpau_3298
SMART: von Willebrand factor type A; KEGG: mjl:Mjls_4693 von Willebrand factor, type A.
       0.491
Tpau_3299
KEGG: rha:RHA1_ro05589 magnesium chelatase subunit ChlI.
       0.486
Tpau_3303
KEGG: mgi:Mflv_5265 hypothetical protein.
       0.428
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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