Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_3312PFAM: protein of unknown function DUF1396; KEGG: mbo:Mb1301c putative lipoprotein LprA. (262 aa)    
Predicted Functional Partners:
Tpau_0368
PFAM: major facilitator superfamily MFS_1; KEGG: mjl:Mjls_2428 major facilitator transporter.
 
   
 0.748
Tpau_1886
KEGG: mav:MAV_3587 hypothetical protein.
  
     0.681
Tpau_3313
KEGG: mbt:JTY_1303 conserved putative secreted protein.
       0.677
Tpau_3001
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mab:MAB_3080 putative antibiotic biosynthesis monooxygenase.
  
     0.666
Tpau_0902
KEGG: mab:MAB_3725c hypothetical protein.
  
     0.660
Tpau_2599
PFAM: lipolytic protein G-D-S-L family; KEGG: mbt:JTY_0531 hypothetical protein.
  
     0.635
Tpau_3796
PFAM: Mammalian cell entry related domain protein; KEGG: rop:ROP_18060 putative Mce family protein.
  
     0.635
Tpau_4221
KEGG: mva:Mvan_6060 hypothetical protein.
  
     0.606
Tpau_1490
PFAM: cutinase; KEGG: msm:MSMEG_1403 cutinase superfamily protein.
  
   
 0.589
Tpau_4078
PFAM: acyltransferase 3; KEGG: msm:MSMEG_5041 acyltransferase.
  
     0.577
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.