Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_3348PFAM: iron permease FTR1; Peptidase M75, Imelysin; KEGG: mab:MAB_1159 putative iron permease FTR1. (677 aa)    
Predicted Functional Partners:
Tpau_3347
Dyp-type peroxidase family; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
  
 0.997
Tpau_3201
KEGG: msm:MSMEG_5829 Dyp-type peroxidase; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase.
  
  
 0.960
Tpau_1732
Iron (metal) dependent repressor, DtxR family; KEGG: mtb:TBMG_01186 transcriptional repressor SirR; PFAM: iron dependent repressor; FeoA family protein; regulatory protein MarR; SMART: iron dependent repressor; regulatory protein Crp.
     
 0.736
Tpau_2070
PFAM: extracellular solute-binding protein family 1; KEGG: mva:Mvan_3093 extracellular solute-binding protein.
   
  
 0.685
Tpau_2099
PFAM: extracellular solute-binding protein family 1; KEGG: rop:ROP_66360 putative ABC transporter substrate-binding protein.
   
  
 0.685
Tpau_2730
KEGG: mab:MAB_1013 hypothetical protein.
  
     0.606
Tpau_1581
PFAM: polysaccharide biosynthesis protein; KEGG: rha:RHA1_ro05738 MOP superfamily O-antigen transporter.
  
     0.589
Tpau_3349
KEGG: msm:MSMEG_5545 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA- binding; Belongs to the FPG family.
       0.568
Tpau_3685
PFAM: AMP-dependent synthetase and ligase; KEGG: rop:ROP_48840 2,3-dihydroxybenzoate-AMP ligase.
   
    0.552
Tpau_0433
KEGG: mpa:MAP2368c hypothetical protein.
 
  
 0.551
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.