Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3354PFAM: regulatory protein TetR; KEGG: nfa:nfa11460 putative transcriptional regulator. (210 aa)    
Predicted Functional Partners:
Tpau_3353
TIGRFAM: precorrin-6A synthase (deacetylating); KEGG: cai:Caci_6988 precorrin-6A synthase (deacetylating); PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
       0.778
Tpau_0046
PFAM: regulatory protein TetR; KEGG: rop:ROP_15500 putative TetR family transcriptional regulator.
  
     0.568
Tpau_3355
Hypothetical protein; KEGG: GK23094 gene product from transcript GK23094- RA.
       0.530
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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