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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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co-expression
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gene co-occurrence
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[Homology]
Score
Tpau_3389PFAM: NUDIX hydrolase; KEGG: ace:Acel_1185 NUDIX hydrolase. (181 aa)    
Predicted Functional Partners:
Tpau_0472
PFAM: Squalene/phytoene synthase; KEGG: krh:KRH_20840 phytoene synthase.
  
  
 0.616
infA
Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
  
  
 0.607
Tpau_3390
TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: rer:RER_20030 O-acetylhomoserine (thiol)- lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase.
       0.563
Tpau_0484
KEGG: rha:RHA1_ro01107 phytoene dehydrogenase; TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase.
 
  
 0.514
Tpau_3352
PFAM: fatty acid hydroxylase; KEGG: nfa:nfa53570 hypothetical protein.
  
  
 0.459
Tpau_2662
PFAM: Polyprenyl synthetase; KEGG: nfa:nfa17390 putative polyprenyl synthase; Belongs to the FPP/GGPP synthase family.
  
  
 0.457
Tpau_2495
PFAM: Lycopene beta and epsilon cyclase; KEGG: nfa:nfa34900 putative lycopene cyclase.
 
  
 0.407
Tpau_0733
Trans-hexaprenyltranstransferase; KEGG: rha:RHA1_ro01991 polyprenyl synthetase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
  
 0.402
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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