Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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co-expression
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Score
Tpau_3393KEGG: rop:ROP_35660 putative MerR family transcriptional regulator; PFAM: TipAS antibiotic-recognition domain protein; Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR. (254 aa)    
Predicted Functional Partners:
Tpau_3392
KEGG: rer:RER_17190 hypothetical protein.
       0.581
Tpau_3394
PFAM: sodium:dicarboxylate symporter; KEGG: rer:RER_18260 C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
     
 0.510
Tpau_0284
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: msm:MSMEG_3964 pyruvate dehydrogenase; Belongs to the TPP enzyme family.
  
  
 0.438
Tpau_0636
KEGG: mjl:Mjls_2649 MerR family transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR.
  
     0.438
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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