Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3411TIGRFAM: urease, gamma subunit; KEGG: rer:RER_48000 urease gamma subunit; PFAM: Urease gamma subunit region; Belongs to the urease gamma subunit family. (100 aa)    
Predicted Functional Partners:
ureC
TIGRFAM: urease, alpha subunit; KEGG: sgr:SGR_236 urease subunit alpha; PFAM: amidohydrolase; Urease alpha-subunit domain protein.
 0.999
Tpau_3410
KEGG: rer:RER_47990 urease beta subunit; TIGRFAM: urease, beta subunit; PFAM: Urease beta subunit.
 0.999
Tpau_3406
KEGG: sgr:SGR_233 putative urease accessory protein.
 
 
 0.988
ureG
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
  
 0.972
Tpau_3408
KEGG: sgr:SGR_235 putative urease accessory protein.
 
 
 0.964
Tpau_1594
Urea amidolyase related protein; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; TIGRFAM: urea amidolyase related protein; KEGG: msm:MSMEG_2187 UreA amidolyase; PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1.
     
 0.927
Tpau_1595
KEGG: msm:MSMEG_2189 allophanate hydrolase; TIGRFAM: allophanate hydrolase; PFAM: Amidase.
     
  0.900
Tpau_3405
PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: rer:RER_04900 hypothetical protein.
       0.500
Tpau_3412
PFAM: TAP domain protein; KEGG: nfa:nfa55080 putative hydrolase.
       0.491
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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