Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3423SMART: AAA ATPase; KEGG: mva:Mvan_1183 AAA ATPase. (1104 aa)    
Predicted Functional Partners:
Tpau_3422
KEGG: msm:MSMEG_3595 hypothetical protein.
 
     0.957
Tpau_4047
PFAM: Protein of unknown function DUF2306, membrane; KEGG: mva:Mvan_1316 hypothetical protein.
  
     0.722
Tpau_1168
PFAM: Erythromycin esterase; KEGG: dra:DR_A0345 hypothetical protein.
  
     0.587
Tpau_2330
KEGG: mab:MAB_2408c hypothetical protein.
  
     0.564
Tpau_3539
PFAM: Forkhead-associated protein; KEGG: nfa:nfa8620 hypothetical protein.
  
     0.535
Tpau_3307
KEGG: nfa:nfa49890 antigen 34 kDa family protein.
  
     0.527
Tpau_3378
KEGG: nfa:nfa8520 hypothetical protein.
 
     0.523
Tpau_3126
KEGG: rha:RHA1_ro00245 hypothetical protein.
  
     0.460
rplX
Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
       0.443
rplN
Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
       0.443
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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