Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_3444PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: rer:RER_34410 flavin-containing monooxygenase. (491 aa)    
Predicted Functional Partners:
Tpau_3445
PFAM: ABC-1 domain protein; KEGG: nfa:nfa38150 putative ATP-binding protein.
     
 0.565
Tpau_3516
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mab:MAB_4052c putative lipase/esterase.
  
 0.466
Tpau_3446
KEGG: nfa:nfa21790 hypothetical protein.
       0.455
Tpau_3448
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: kra:Krad_2496 alcohol dehydrogenase GroES domain protein.
  
    0.454
Tpau_2227
PFAM: cytochrome P450; KEGG: rer:pREC1_0055 cytochrome P450.
 
 
 0.439
Tpau_0726
PFAM: Saccharopine dehydrogenase; KEGG: rha:RHA1_ro00897 hypothetical protein.
  
   
 0.437
Tpau_0476
PFAM: alpha/beta hydrolase fold; KEGG: mav:MAV_4120 hydrolase, alpha/beta fold family protein, putative.
  
   0.435
Tpau_3447
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: nfa:nfa50680 putative oxidoreductase.
     
 0.422
Tpau_1519
KEGG: bur:Bcep18194_B3011 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
 
     0.410
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.