Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3462PFAM: regulatory protein TetR; KEGG: ami:Amir_2879 regulatory protein TetR. (221 aa)    
Predicted Functional Partners:
Tpau_3463
PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: rer:RER_19900 monooxygenase.
 
     0.767
Tpau_3208
PFAM: Limonene-12-epoxide hydrolase; KEGG: mmi:MMAR_1973 hypothetical protein.
  
     0.628
Tpau_2535
PFAM: Limonene-12-epoxide hydrolase; KEGG: mmi:MMAR_1973 hypothetical protein.
  
     0.605
Tpau_0040
PFAM: regulatory protein TetR; KEGG: sen:SACE_5722 TetR family transcriptional regulator.
  
     0.483
Tpau_3464
KEGG: mmi:MMAR_1405 hypothetical protein.
       0.443
Tpau_4132
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: nfa:nfa18310 putative transcriptional regulator.
  
     0.419
Tpau_1662
Transcriptional regulator, TetR family; PFAM: Tetracyclin repressor domain protein; regulatory protein TetR; KEGG: sma:SAV_3379 TetR family transcriptional regulator.
  
     0.403
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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