Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3513PFAM: FAD dependent oxidoreductase; KEGG: nfa:nfa28620 putative monooxygenase. (494 aa)    
Predicted Functional Partners:
Tpau_3512
Transcriptional regulator, MerR family; KEGG: nfa:nfa28610 putative transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR.
 
     0.906
Tpau_3516
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mab:MAB_4052c putative lipase/esterase.
  
 0.869
Tpau_3515
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nfa:nfa28640 putative short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.865
Tpau_3514
KEGG: nfa:nfa28630 hypothetical protein.
 
     0.844
Tpau_2257
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rop:ROP_60670 putative alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.550
Tpau_3517
PFAM: Oxidoreductase FAD-binding domain protein; ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: mab:MAB_3918c putative oxidoreductase.
     
 0.521
Tpau_0476
PFAM: alpha/beta hydrolase fold; KEGG: mav:MAV_4120 hydrolase, alpha/beta fold family protein, putative.
  
   0.498
Tpau_1931
Acyltransferase, WS/DGAT/MGAT; KEGG: rha:RHA1_ro01601 hypothetical protein; TIGRFAM: acyltransferase, WS/DGAT/MGAT; PFAM: protein of unknown function UPF0089; Belongs to the long-chain O-acyltransferase family.
  
   0.492
Tpau_1209
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rer:RER_41250 alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.475
Tpau_0726
PFAM: Saccharopine dehydrogenase; KEGG: rha:RHA1_ro00897 hypothetical protein.
  
   
 0.473
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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