Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3530Hypothetical protein. (65 aa)    
Predicted Functional Partners:
Tpau_3532
PFAM: ABC-2 type transporter; KEGG: cef:CE1020 hypothetical protein.
       0.818
Tpau_3531
KEGG: rer:RER_59620 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.778
Tpau_3533
PFAM: histidine kinase dimerisation and phosphoacceptor region; KEGG: rer:RER_59600 two-component histidine kinase.
       0.655
Tpau_3534
KEGG: rer:RER_59590 NarL family two-component response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR.
       0.651
Tpau_3529
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rer:RER_49680 ABC transporter permease protein.
       0.425
Tpau_3528
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro05115 ABC sugar transporter, permease component.
       0.424
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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